chm13_meth:chm13装配体中chrx的甲基化分析 源码
chm13_meth chm13装配体着丝粒与整个染色体的甲基化分析 依存关系 knitr tidyverse bsseq Biostrings GenomicRanges Rsamtools Sushi纳米Kong-甲基化实用程序 生成输入文件 调用甲基化染色体 nanopolish call-methylation -t 8 -r albacore_output.fastq -b albacore_output.sorted.bam -g reference.fasta -w "chr8" > chr8_methylation_calls.tsv scripts/calculate_methylation_frequency.py -i methylation_calls.tsv > chr8_methylation_frequency.tsv 使用Isac的回购纳米Kong甲基化实
文件列表
chm13_meth:chm13装配体中chrx的甲基化分析
(预估有个260文件)
call_meth_pipeline_config-checkpoint
5KB
call_meth_pipeline_config
5KB
201009_NanoNOMe_chm13_mappability.nb.html
657KB
region_tmp.bed
80B
2020-05-07T125313.769240.snakemake.log
199B
2020-05-07T125022.324950.snakemake.log
6KB
2020-05-07T124422.592371.snakemake.log
199B
2020-05-07T114405.861767.snakemake.log
209B
2020-05-07T130603.099426.snakemake.log
307B
2020-05-07T130748.567387.snakemake.log
252B
暂无评论