gut_virome_db 源码
gut_virome_db:删除冗余 数据: GVD_sequences.fa: ://datacommons.cyverse.org/browse/iplant/home/shared/iVirus/Gregory_and_Zablocki_GVD_Jul2020/GVD_Viral_Populations/GVDv1_viralpopulations.fna.tar.gz GPD_sequences.fa: ://ftp.ebi.ac.uk/pub/databases/metagenomics/genome_sets/gut_phage_database/GPD_sequences.fa 在run.sh中的完整代码 聚类结果存储在“输出”文件夹中
文件列表
gut_virome_db-main.zip
(预估有个14文件)
gut_virome_db-main
blast_cluster.v3.pl
2KB
blast_cvg.pl
1KB
Output
GVD.i95_c40.uniq
2.68MB
GVD.i95_c50.uniq
2.68MB
GVD.i95_c75.uniq
2.69MB
GVD.i95_c60.uniq
2.68MB
GPD_sequences.sort.len
2.43MB
GVD_sequences.sort.len
1.87MB
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