Pseudomonas aeruginosa ICU patients 源码
标题 概括 依存关系 的Python 3.7 Perl RAxML R版本3.5.1 wa samtools 黑桃 回购内容 元数据:用于分析的样本数据和预处理数据。 PA ref基因组: PA ref gff文件: dir:其他细菌的基因组 结果: 脚本: SNP呼叫 映射到参考基因组: SNP呼叫 iSNV_calling.sh 3 iSNV_calling.sh 4 重复区域 将ref基因组切割为150bp的模拟序列: python切 将模拟读数映射到其他细菌基因组 系统发育分析 准备SNP序列: python XXX 系统发育分析原为 raxmlHPC-PTHREADS -s $align_trim_file -n raxmltree_result -m GTRGAMMAI -fa -x 12345 -N 1000 -p 123456 -T 24 -k
文件列表
Pseudomonas-aeruginosa-ICU-patients
(预估有个1351文件)
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